rseqc

Here are 4 public repositories matching this topic...

Count Mapped Exonic Non-Duplicate (MEND) reads in an RNA Seq bam file

docker sambamba mend rseqc samblaster

A modernized rewrite of RSeQC (RNA-seq Quality Control)

rna-seq rseqc

Build Docker container for RseQC and (optionally) convert to Apptainer/Singularity.

docker genomics sequencing singularity qc rseqc apptainer

Reproducible RNA-seq alignment & QC pipeline for S. cerevisiae — HISAT2, RSeQC, Qualimap, MultiQC

bioinformatics rna-seq reproducible-research multiqc hisat2 rseqc qualimap

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