Hybridization detection using phylogenetic invariants
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Updated
Oct 29, 2024 - Python
Hybridization detection using phylogenetic invariants
Visualing species tree from ASTRAL with gene tree discordance
DFOIL: Introgression Testing for Five Taxa
Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables
Hybridization Detection with Convolutional Neural Networks
Visualization of Hybrid Organic compounds with graphs
Hybrid discretisation methods in Julia (VEM, HDG, HHO, etc) 🚧 🚧 🚧 Work in progress 🚧 🚧🚧
An expert-guided workflow integrating D-statistic screening and BPP-based Bayesian model testing to reconstruct reticulate evolutionary histories.
Suitable Finite Element methods for Porous Media flow using Firedrake Project framework
MATLAB suite of high-order CG and DG finite element solvers for time-harmonic wave propagation
Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile
Spell Fusion Arena
All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia
A Comprehensive Study of Deep Learning Models and Hybridization for Sentiment Analysis on the Twitter Dataset
This repository includes R scripts and data for analysing the effect of elevated temperature on larval morphology in Triturus newts. Associated results are published in Milić et al. 2026, J. Therm. Biol. (https://doi.org/10.1016/j.jtherbio.2026.104479)
Tutorial, code, and data for Evolution 2017
Hybridization Models Maximum Likelihood Estimator
This repository contains all data and scripts used to analyze reproductive isolation barriers for the "Testing the predictions of reinforcement: long-term empirical data from a damselfly mottled hybrid zone" manuscript.
The LaTeX source for my PhD Thesis, the viva for which took place in September, 2016.
Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files
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