brain-network

Easy whole-brain modeling for computational neuroscientists 🧠💻👩🏿‍🔬

Some tools for the extraction and plot of second-level ROI-to-ROI results from CONN Toolbox

Algorithms and functions in Matlab for community detection in networks. Expands BrainConnectivity toolbox

[MICCAI 2025] Source code for paper: DHGFormer: Dynamic Hierarchical Graph Transformer for Disorder Brain Disease Diagnosis

This is the repository for paper `Learning Task-Aware Effective Brain Connectivity for fMRI Analysis with Graph Neural Networks'.

Brain graph super-resolution using graph neural networks.

Investigating the reproducibility of federated GNN models

A Python toolbox for predicting brain network (graph) evolution over time from a single observation. The codes of the 20 competing Kaggle teams along with the competition datasets are made available.

ABMT (Adversarial Brain Multiplex Translator) for brain graph translation using geometric generative adversarial network (gGAN).

Functional connectivity and brain network analysis for motor imagery data in stroke patients

[MICCAIW 2025 Best Paper Award] official code of BrainNetMLP for functional brain network classification, which is accepted by the 1st Efficient Workshop of MICCAI 2025.

Resting-state fMRI functional connectivity, connectome, brain network and hypergraph analysis in Python with a local GUI. 静息态 fMRI · 功能连接矩阵 · 脑网络 · 超图分析

Federated time-dependent graph evolution prediction with missing timepoints.

Supervised graph diffusion and fusion.

Official implementation of MGCL-DA for rs-fMRI-based brain disorder diagnosis (MICCAI 2025 Early Accept).

Official code implementation of our paper "Uncovering Latent Communication Patterns in Brain Networks via Adaptive Flow Routing" (ICML-2026)

MINODES: MARCH-INSIDE for Network Nodes

Deep learning brain functional network classifier covering preprocessing, feature engineering, training, evaluation, and explainability.

Simulating cost of trauma in brain networks