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biojava
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biojava
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History for
biojava
biojava-structure
src
main
java
demo
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java9
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Commits on Mar 14, 2018
Add license to all files
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sbliven
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Commits on Jan 19, 2018
Small refactoring for more flexible symmetry detection.
Dmytro Guzenko
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Commits on Dec 7, 2017
New demo for mmcif to pdb conversion
josemduarte
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Commits on Oct 9, 2017
A fix for #708
josemduarte
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Commits on Oct 5, 2017
A new dome for quat symmetry detection
josemduarte
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Commits on Oct 4, 2017
New bioassembly demo
josemduarte
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Commits on Jul 25, 2016
Implement test for QsAlign algorithm
lafita
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Commits on Jul 21, 2016
Complete the QsAlign algorithm
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lafita
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Commits on Jul 1, 2016
now printing author chain ID
andreasprlic
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Commits on Jun 17, 2016
adding biojava's internal sec struc assignment to example
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Commits on Jun 7, 2016
Refactored getChain(int chainIndex) and getChain(int modelNr, int chainIndex) to getChainByIndex().
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abradle
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Commits on May 19, 2016
Now getting mmSize from num operators and chains.
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Fixed a bug in reconstructing the bioassembly from pdb format.
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Commits on May 12, 2016
Reverting getPolyChainsByPDB, keeping getNonPolyChainsByPDB
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Commits on May 11, 2016
changing get*ChainByPDB methods signature to return List<Chain>
andreasprlic
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Commits on May 10, 2016
Important bug fixes and docs in Structure/StructureImpl.
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Commits on Apr 20, 2016
Some refactoring and docs
josemduarte
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Commits on Apr 19, 2016
Additional testing of the reader and writer.
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Refactored function names in MMTFActions
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Commits on Apr 12, 2016
Updates to Biojava to remove any mention of the Messagepack serializer /deserializer
abradle
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Commits on Apr 11, 2016
Updates and documentation to the MmtfActions class.
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Commits on Apr 9, 2016
Updates to the reader and writer due to downstream changes in the mmtf
abradle
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Updated to initialise all the arrays during the writing process
abradle
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Commits on Apr 8, 2016
Updates to the Demos so they are mains.
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Added three new demos (reader, writer and roundtrip) to Biojava.
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Commits on Mar 31, 2016
Refactoring of Compound to EntityInfo
abradle
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Commits on Mar 23, 2016
Refactoring of getters and setters.
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Commits on Mar 14, 2016
Updates to the Biojava code to include imporved handling of Entity information.
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Commits on Mar 10, 2016
Light cleanup:
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Running spacestotabs on recent changes
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Commits on Mar 9, 2016
Merge branch 'master' into removeLoadChemCompInfo
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josemduarte
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More whitespace fixes
sbliven
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af59f90
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Converting initial spaces to tabs.
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Remove trailing whitespace globally from .java files
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Commits on Mar 8, 2016
Removing loadChemCompInfo, some tests don't pass yet
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