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pdbe-api-training
pdbe-api-training PublicInteractive Python notebooks for PDBe API training
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PDBe-MCP-Servers
PDBe-MCP-Servers PublicPDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema as…
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Notebook-Driven Development to nurture new features supported and maintained by our diverse user base.
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A set of python tools to deal with PDB chemical components definitions for small molecules, taken from the wwPDB Chemical Component Dictionary, uses RDKit
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Real-time VSCode extension and standalone Python script for validating mmCIF/CIF files against the PDBx/mmCIF dictionary or any CIF dictionary.
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PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema assistance for intelligent Cypher query generation, bridging structural biology and AI research.
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This repository provides a set of easy-to-use tools for generating the required files and metadata to seamlessly integrate your models into AFDB.
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