clara-parabricks

Repositories

• VariantWorks

  DL based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/
  Python Apache-2.0 4 12 20 3 Updated Sep 2, 2020

• GenomeWorks

  SDK for GPU accelerated genome assembly and analysis

  genomics mapping gpu cuda nvidia alignment python-api
  Cuda Apache-2.0 54 177 69 (6 issues need help) 9 Updated Sep 1, 2020

• AtacWorks

  Deep learning based processing of Atac-seq data
  Jupyter Notebook 10 41 15 1 Updated Sep 1, 2020

• racon-gpu

  Forked from lbcb-sci/racon

  Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads
  C++ MIT 17 9 7 1 Updated Aug 21, 2020

• rapids-single-cell-examples

  Examples of single-cell genomic analysis accelerated with RAPIDS
  Jupyter Notebook Apache-2.0 15 71 3 1 Updated Aug 18, 2020

• gpuci-build-environment

  Clara Genomics build environment for gpuCI
  Dockerfile Apache-2.0 1 2 0 0 Updated Aug 6, 2020

• clara-parabricks.github.io
  HTML 0 1 0 0 Updated Aug 5, 2020

• Compute4COVID

  Getting started guide to using GPUs for nCoV2019 research
  2 10 0 0 Updated Apr 24, 2020

• DL4VC
  Python Apache-2.0 2 3 0 0 Updated Mar 16, 2020